The Van Doorslaer lab at the University of Arizona

Publications involving our group at the University of Arizona

   mentees in the KVD lab are highlighted in bold and italics

   *work performed in graduate school  |  $ (co-)corresponding authorship

  1. Tobey IG, Kosanke DP, King KM, Uhlorn BL, Jeevanandam A, Campos SK, Van Doorslaer K$. HPV18 infection blunts STING signaling and alters downstream response. bioRxiv [Preprint]. 2025 Nov 6:2025.11.06.686957. doi: 10.1101/2025.11.06.686957.
  2. Agosta EJ, Chang YC, Rao V, Hollingsworth J, Brown M, Kabiraj D, Einstein M, Van Arsdale A, Van Doorslaer K, Chan C, De S, Madireddy A, Haas BJ, Miller DE, Lenz J, Montagna C. Complex HPV-human DNA structures revealed by large-scale DNA analyses in an HPV-cancer derived cell line. bioRxiv [Preprint]. 2025 Oct 6:2025.10.06.680684. doi: 10.1101/2025.10.06.680684. PMID: 41332776. Pubmed.
  3. Mayne R, Simmonds P, Smith DB, Adriaenssens EM, Lefkowitz EJ, Oksanen HM, Zerbini FM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Krupovic M, Kuhn JH, Łobocka M, Mushegian AR, Penzes J, Muñoz AR, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Suzuki N, Turner D, Van Doorslaer K, Varsani A. Virus taxonomy proposal summaries: a searchable and citable resource to disseminate virus taxonomy advances. J Gen Virol. 2025 Jul;106(7):002079. doi: 10.1099/jgv.0.002079. PMID: 40711816. Pubmed.
  4. Varsani A, Abd-Alla AMM, Arnberg N, Bateman KS, Benkő M, Bézier A, Biagini P, Bojko J, Butkovic A, Canuti M, Celer V, Drezen JM, Egyed L, Fischer MG, François S, Guinet B, Harrach B, Harrison RL, Herniou EA, Hess M, Hu J, Jehle JA, Kaján GL, Kajon AE, Koonin EV, Kraberger S, Krell PJ, Krupovic M, Kuhn JH, Lei C, Leobold M, Maggi F, Mittal SK, Okamoto H, Opriessnig T, Peng X, Pénzes J, Podgorski II, Postler TS, Ribeiro BM, San Martín C, Söderlund-Venermo M, Sun X, Surján A, Tarján ZL, Varaldi J, Vidovszky MZ, Wadell G, Watanabe H, Yutin N, van Oers MM; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Animal DNA Viruses and Retroviruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002113. doi: 10.1099/jgv.0.002113. PMID: 40711809. Pubmed.
  5. Hughes HR, Ballinger MJ, Bao Y, Bejerman N, Blasdell KR, Briese T, Brignone J, Carrera JP, De Coninck L, de Souza WM, Debat H, Dietzgen RG, Dürrwald R, Erdin M, Fooks AR, Forbes KM, Freitas-Astúa J, Garcia JB, Geoghegan JL, Grimwood RM, Horie M, Hyndman TH, Johne R, Klena JD, Kondo H, Koonin EV, Kostygov AY, Krupovic M, Kuhn JH, Letko M, Li JM, Liu Y, Martin ML, Mull N, Nazar Y, Nowotny N, Nunes MRT, Økland AL, Rubbenstroth D, Russell BJ, Schott E, Seifert S, Sen C, Shedroff E, Sironen T, Smura T, Tavares CPDS, Tesh RB, Tilston NL, Tordo N, Vasilakis N, Walker PJ, Wang F, Whitfield AE, Whitmer SLM, Wolf YI, Xia H, Ye GY, Ye Z, Yurchenko V, Zhao M; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Hendrickson RC, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Penzes J, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Varsani A, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Animal dsRNA and ssRNA(-) Viruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002112. doi: 10.1099/jgv.0.002112. PMID: 40711815. Pubmed.
  6. Sabanadzovic S, Abergel C, Ayllón MA, Botella L, Canuti M, Chiba Y, Claverie J, Coutts RHA, Daghino S, Donaire L, Forgia M, Hejna O, Jia J, Jiang D, Kotta-Loizou I, Krupovic M, Lang AS, Legendre M, Lee Marzano SY, Mu F, Neri U, Nerva L, Pénzes J, Poimala A, Rigou S, Sato Y, Shamsi W, Sutela S, Suzuki N, Turina M, Urayama SI, Vainio EJ, Xie J; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Kuhn JH, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Simmonds P, Smith DB, Turner D, Van Doorslaer K, Varsani A, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Fungal and Protist Viruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002115. doi: 10.1099/jgv.0.002115. PMID: 40711811. Pubmed.
  7. Krupovic M, Baquero DP, Bignon EA, Bize A, Borrel G, Cai M, Chen L, Coves M, Duan C, Gribaldo S, Koonin EV, Li M, Liu L, Liu Y, Liu Y, Medvedeva S, Ni Y, Prabhu A, Rinke C, Wang Y, Xu T, Yan S, Zeng Q, Zhang R; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Kuhn JH, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Penzes J, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Varsani A, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Archaeal Viruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002117. doi: 10.1099/jgv.0.002117. PMID: 40711890. Pubmed.
  8. Turner D, Adriaenssens EM, Amann RI, Bardy P, Bartlau N, Barylski J, Błażejak S, Bouzari M, Briegel A, Briers Y, Carrillo D, Chen X, Claessen D, Cook R, Crisci MA, Dechesne A, Deptula P, Dutilh BE, Ely B, Fieseler L, Fogg PCM, Fukudome A, Ganjoor MS, Gientka I, Holmfeldt K, Kalatzis PG, Kauffman KM, Kempff A, Knezevic P, Koonin EV, Kropinski AM, Krupovic M, Kurtböke I, Lambon K, Lavigne R, Lehman SM, Liu HT, Lood C, Lurz R, Mäntynen S, Matrishin CB, Middelboe M, Millard AD, Moraru C, Nielsen DS, Nobrega FL, Nunoura T, Oksanen HM, Ongenae V, Parra B, Pas C, Pogliano J, Poranen MM, Potipimpanon S, Prichard A, Pye HV, Rothschild-Rodriguez D, Rozen DE, Santini JM, Sha Y, Shymialevich D, Sokołowska B, Soleimani-Delfan A, Średicka P, Tavares P, Telatin A, Tolstoy I, Urayama SI, van Neer V, Vogensen FK, Wen Q, Wichels A, Wójcicki M; ICTV Taxonomy Summary Consortium. Collaborators: Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Kuhn JH, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Penzes J, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Van Doorslaer K, Varsani A, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) from the Bacterial Viruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002111. doi: 10.1099/jgv.0.002111. PMID: 40711892. Pubmed.
  9. Zerbini FM, Crane A, Kuhn JH, Simmonds P, Lefkowitz EJ; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hendrickson RC, Hughes HR, Krupovic M, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Penzes J, Reyes Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Varsani A. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses (ICTV) - General taxonomy proposals, 2025. J Gen Virol. 2025 Jul;106(7):002116. doi: 10.1099/jgv.0.002116. PMID: 40711893. Pubmed.
  10. Rubino L, Abrahamian P, An W, Aranda MA, Ascencio-Ibáñez JT, Bejerman N, Blouin AG, Candresse T, Canto T, Cao M, Carr JP, Cho WK, Constable F, Dasgupta I, Debat H, Dietzgen RG, Digiaro M, Donaire L, Elbeaino T, Fargette D, Filardo F, Fischer MG, Fontdevila N, Fox A, Freitas-Astua J, Fuchs M, Geering ADW, Ghafari M, Hafrén A, Hammond J, Hammond R, Hasiów-Jaroszewska B, Hebrard E, Hernández C, Hily JM, Hosseini A, Hull R, Inoue-Nagata AK, Jordan R, Kondo H, Kreuze JF, Krupovic M, Kubota K, Kuhn JH, Leisner S, Lett JM, Li C, Li F, Li JM, López-Lambertini PM, Lopez-Moya JJ, Maclot F, Mäkinen K, Martin D, Massart S, Miller WA, Mohammadi M, Mollov D, Muller E, Nagata T, Navas-Castillo J, Neriya Y, Ochoa-Corona FM, Ohshima K, Pallás V, Pappu H, Petrzik K, Pooggin M, Prigigallo MI, Ramos-González PL, Ribeiro S, Richert-Pöggeler KR, Roumagnac P, Roy A, Sabanadzovic S, Šafářová D, Saldarelli P, Sanfaçon H, Sarmiento C, Sasaya T, Scheets K, Schravesande WEW, Seal S, Shimomoto Y, Sõmera M, Stavolone L, Stewart LR, Teycheney PY, Thomas JE, Thompson JR, Tiberini A, Tomitaka Y, Tzanetakis I, Umber M, Urbino C, van den Burg HA, Van der Vlugt RAA, Varsani A, Verhage A, Villamor D, von Bargen S, Walker PJ, Wetzel T, Whitfield AE, Wylie SJ, Yang C, Zerbini FM, Zhang S; ICTV Taxonomy Summary Consortium. Collaborators: Adriaenssens EM, Alfenas-Zerbini P, Aylward FO, Hendrickson RC, Hughes HR, Lefkowitz EJ, Łobocka M, Mayne R, Mushegian AR, Oksanen HM, Penzes J, Reyes Muñoz A, Robertson DL, Roux S, Simmonds P, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Zerbini FM. Summary of taxonomy changes ratified by the International Committee on Taxonomy of Viruses from the Plant Viruses Subcommittee, 2025. J Gen Virol. 2025 Jul;106(7):002114. doi: 10.1099/jgv.0.002114. PMID: 40711908. Pubmed.
  11. Cabel CR, Guzman BA, Alizadeh E, Li S, Holberg C, Wichaidit C, Cusanovich DA, Paek AL, Thatcher GRJ, Van Doorslaer K Nargi RS, Sutton RE, Suryadevara N, Crowe JE Jr, Carnahan RH, Campos SK, Thorne CA. Cell-based high-content approach for SARS-CoV-2 neutralization identifies unique monoclonal antibodies and PI3K pathway inhibitors. Front Cell Dev Biol. 2025 May 22;13:1538934. doi: 10.3389/fcell.2025.1538934. eCollection 2025. PMID: 40486909. Pubmed.
  12. Zerbini FM, Simmonds P, Adriaenssens EM, Lefkowitz EJ, Oksanen HM, Alfenas-Zerbini P, Aylward FO, Freitas-Astúa J, Hughes HR, Łobocka M, Krupovic M, Kuhn JH, Mushegian A, Penzes JJ, Reyes A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Varsani A. Virus species names have been standardized; virus names remain unchanged. mSphere. 2025 May 27;10(5):e0002025. doi: 10.1128/msphere.00020-25. Epub 2025 Apr 23. PMID: 40265919. Pubmed.
  13. Payne N, Andersen D, Mollohan C, Van Doorslaer K, Combrink L, Culver M. Urbanisation and Host Relatedness Shape Virome Composition in a Widespread, Generalist Carnivore. Mol Ecol. 2025 Mar;34(6):e17681. doi: 10.1111/mec.17681.Epub 2025 Feb 23. PMID: 39988981. Pubmed.
  14. Van Arsdale A, Mescheryakova O, Gallego S, Maggi EC, Harmon B, Kuo DYS, Van Doorslaer K, Einstein MH, Haas BJ, Montagna C, Lenz J. Serum, Cell-Free, HPV-Human DNA Junction Detection and HPV Typing for Predicting and Monitoring Cervical Cancer Recurrence. medRxiv [Preprint]. 2025 Jan 6:2024.09.16.24313343. doi: 10.1101/2024.09.16.24313343. PMID: 39830266; PMCID: PMC11741462.. Pubmed.
  15. Dommer J, Van Doorslaer K, Afrasiabi C, Browne K, Ezeji S, Kim L, Dolan M, McBride AA. PaVE 2.0: Behind the Scenes of the Papillomavirus Episteme. J Mol Biol. 2024 Dec 26:168925. doi: 10.1016/j.jmb.2024.168925. Epub ahead of print. PMID: 39732323.. Pubmed.
  16. Simmonds P, Adriaenssens EM, Lefkowitz EJ, Oksanen HM, Siddell SG, Zerbini FM, Alfenas-Zerbini P, Aylward FO, Dempsey DM, Dutilh BE, Freitas-Astúa J, García ML, Hendrickson RC, Hughes HR, Junglen S, Krupovic M, Kuhn JH, Lambert, AJ, Łobocka M, Mushegian AR, Penzes J, Muñoz AR, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Smith DB, Suzuki N, Turner D, Van Doorslaer K, Vandamme AM, Varsani A. Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2024). Arch Virol. 2024 Nov 3;169(11):236. doi: 10.1007/s00705-024-06143-y. PMID: 39488803; PMCID: PMC11532311. Pubmed.
  17. PRMT1 Modulates Alternative Splicing to Enhance HPV18 mRNA Stability and Promote the Establishment of Infection. Williams DEJ$, King K$, Jackson R$, Kuehner F$, Arnoldy C, Marroquin JN$, Tobey I$, Banka A$, Ragonese S$, Van Doorslaer K$. bioRxiv 2024.09.26.614592; doi: https://doi.org/10.1101/2024.09.26.614592.
  18. Dancy E, Stratton P, Pichard DC, Marciano BE, Cowen EW, McBride AA, Van Doorslaer K, Merideth MA, Salmeri N, Hughes MS, Heller T, Parta M, Hickstein DD, Kong HH, Holland SM, Zerbe CS. Human papillomavirus disease in GATA2 deficiency: a genetic predisposition to HPV-associated female anogenital malignancy. Front Immunol. 2024 Aug 29;15:1445711. doi: 10.3389/fimmu.2024.1445711. PMID: 39267745; PMCID: PMC11390362.. Pubmed.
  19. Alwine J, Goodrum F, Banfield B, Bloom D, Britt WJ, Broadbent AJ, Campos SK, Casadevall A, Chan GC, Cliffe AR, Dermody T, Duprex P, Enquist LW, Frueh K, Geballe AP, Gaglia M, Goldstein S, Greninger AL, Gronvall GK, Jung JU, Kamil JP, Lakdawala S, Liu S-L, Luftig M, Moore JP, Moscona A, Neuman BW, Nikolich JŽ, O'Connor C, Pekosz A, Permar S, Pfeiffer J, Purdy J, Rasmussen A, Semler B, Smith GA, Stein DA, Van Doorslaer K, Weller SK, Whelan SPJ, Yurochko A. The harms of promoting the lab leak hypothesis for SARS-CoV-2 origins without evidence. J Virol. 2024 Sep 17;98(9):e0124024. doi: 10.1128/jvi.01240-24. Epub 2024 Aug 1. PMID: 39087765; PMCID: PMC11406950.. Pubmed.
  20. Van Arsdale A, Turker L, Chang YC, Gould J, Harmon B, Maggi EC, Meshcheryakova O, Brown MP, Luong D, Van Doorslaer K, Einstein MH, Kuo DYS, Zheng D, Haas BJ, Lenz J, Montagna C. Structure and transcription of integrated HPV DNA in vulvar carcinomas. NPJ Genom Med. 2024 Jun 19;9(1):35. doi: 10.1038/s41525-024-00418-8. PMID: 38898085; PMCID: PMC11187145.. Pubmed.
  21. Lee MS, Tuohy PJ, Kim CY, Yost PP, Lichauco K, Parrish HL, Van Doorslaer K$, Kuhns MS. The CD4 transmembrane GGXXG and juxtamembrane (C/F)CV+C motifs mediate pMHCII-specific signaling independently of CD4-LCK interactions. Elife. 2024 Apr 19;12:RP88225. doi: 10.7554/eLife.88225. PMID: 38639990; PMCID: PMC11031086.. Pubmed.
  22. Regney M, Kraberger S, Custer JM, Crane AE, Shero MR, Beltran RS, Kirkham AL, Van Doorslaer K, Stone AC, Goebel ME, Burns JM, Varsani A. Diverse papillomaviruses identified from Antarctic fur seals, leopard seals and Weddell seals from the Antarctic. Virology. 2024 Jun;594:110064. doi: 10.1016/j.virol.2024.110064. Epub 2024 Mar 21. PMID: 38522135.. Pubmed.
  23. Rasmussen AL, Gronvall GK, Lowen AC, Goodrum F, Alwine J, Andersen KG, Anthony SJ, Baines J, Banerjee A, Broadbent AJ, Brooke CB, Campos SK, Caposio P, Casadevall A, Chan GC, Cliffe AR, Collins-McMillen D, Connell N, Damania B, Daugherty MD, Debbink K, Dermody TS, DiMaio D, Duprex WP, Emerman M, Galloway DA, Garry RF, Goldstein SA, Greninger AL, Hartman AL, Hogue BG, Horner SM, Hotez PJ, Jung JU, Kamil JP, Karst SM, Laimins L, Lakdawala SS, Landais I, Letko M, Lindenbach B, Liu S-L, Luftig M, McFadden G, Mehle A, Morrison J, Moscona A, Mühlberger E, Munger J, Münger K, Murphy E, Neufeldt CJ, Nikolich JZ, O'Connor CM, Pekosz A, Permar SR, Pfeiffer JK, Popescu SV, Purdy JG, Racaniello VR, Rice CM, Runstadler JA, Sapp MJ, Scott RS, Smith GA, Sorrell EM, Speranza E, Streblow D, Tibbetts SA, Toth Z, Van Doorslaer K, Weiss SR, White EA, White TM, Wobus CE, Worobey M, Yamaoka S, Yurochko A. Virology-the path forward. J Virol. 2024 Jan 23;98(1):e0179123. doi: 10.1128/jvi.01791-23. Epub 2024 Jan 3. Erratum in: J Virol. 2024 Mar 19;98(3):e0007424. doi: 10.1128/jvi.00074-24. PMID: 38168672; PMCID: PMC10804978.. Pubmed.
  24. Jackson R, Rajadhyaksha EV, Loeffler RS, Flores CE, Van Doorslaer K$. Characterization of 3D organotypic epithelial tissues reveals tonsil-specific differences in tonic interferon signaling. PLoS One. 2023 Oct 4;18(10):e0292368. doi: 10.1371/journal.pone.0292368. eCollection 2023. PMID: 37792852. Pubmed.
  25. Zerbini FM, Siddell SG, Lefkowitz EJ, Mushegian AR, Adriaenssens EM, Alfenas- Zerbini P, Dempsey DM, Dutilh BE, García ML, Hendrickson RC, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Łobocka M, Oksanen HM, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Van Doorslaer K, Vandamme AM, Varsani A. Changes to virus taxonomy and the ICTV Statutes ratified by the International Committee on Taxonomy of Viruses (2023). Arch Virol. 2023 Jun 10;168(7):175. doi: 10.1007/s00705-023-05797-4. PMID: 37296227.. Pubmed.
  26. Lund MC, Larsen BB, Rowsey DM, Otto HW, Gryseels S, Kraberger S, Custer JM, Steger L, Yule KM, Harris RE, Worobey M, Van Doorslaer K, Upham NS, Varsani A. Using archived and biocollection samples towards deciphering the DNA virus diversity associated with rodent species in the families cricetidae and heteromyidae. Virology. 2023 Aug;585:42-60. doi: 10.1016/j.virol.2023.05.006. Epub 2023 Jun 1. PMID: 37276766. . Pubmed.
  27. Siddell SG, Smith DB, Adriaenssens E, Alfenas-Zerbini P, Dutilh BE, Garcia ML, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Lefkowitz EJ, Łobocka M, Mushegian AR, Oksanen HM, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Suzuki N, Van Doorslaer K, Vandamme AM, Varsani A, Zerbini FM. Virus taxonomy and the role of the International Committee on Taxonomy of Viruses (ICTV). J Gen Virol. 2023 May;104(5):001840. doi: 10.1099/jgv.0.001840. PMID: 37141106; PMCID: PMC10227694.. Pubmed.
  28. Bedard MC, Chihanga T, Carlile A, Jackson R, Brusadelli MG, Lee D, VonHandorf A, Rochman M, Dexheimer PJ, Chalmers J, Nuovo G, Lehn M, Williams DEJ, Kulkarni A, Carey M, Jackson A, Billingsley C, Tang A, Zender C, Patil Y, Wise-Draper TM, Herzog TJ, Ferris RL, Kendler A, Aronow BJ, Kofron M, Rothenberg ME, Weirauch MT, Van Doorslaer K, Wikenheiser-Brokamp KA, Lambert PF, Adam M, Steven Potter S, Wells SI. Single cell transcriptomic analysis of HPV16-infected epithelium identifies a keratinocyte subpopulation implicated in cancer. Nat Commun. 2023 Apr 8;14(1):1975. doi: 10.1038/s41467-023-37377-0. PMID: 37031202; PMCID: PMC10082832.. Pubmed.
  29. Harding C, Larsen BB, Otto HW, Potticary AL, Kraberger S, Custer JM, Suazo C, Upham NS, Worobey M, Van Doorslaer K, Varsani A. Diverse DNA virus genomes identified in fecal samples of Mexican free-tailed bats (Tadarida brasiliensis) captured in Chiricahua Mountains of southeast Arizona (USA). Virology. 2023 Mar;580:98-111. doi: 10.1016/j.virol.2023.02.004. Epub 2023 Feb 12. PMID: 36801670. Pubmed.
  30. Simmonds P, Adriaenssens EM, Zerbini FM, Abrescia NGA, Aiewsakun P, Alfenas-Zerbini P, Bao Y, Barylski J, Drosten C, Duffy S, Duprex WP, Dutilh BE, Elena SF, García ML, Junglen S, Katzourakis A, Koonin EV, Krupovic M, Kuhn JH, Lambert AJ, Lefkowitz EJ, Łobocka M, Lood C, Mahony J, Meier-Kolthoff JP, Mushegian AR, Oksanen HM, Poranen MM, Reyes-Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Siddell S, Skern T, Smith DB, Sullivan MB, Suzuki N, Turner D, Van Doorslaer K Vandamme AM, Varsani A, Vasilakis N. Four principles to establish a universal virus taxonomy. PLoS Biol 2023 Feb 13;21(2):e3001922. doi: 10.1371/journal.pbio.3001922. eCollection 2023 Feb. .
  31. Goodrum F, Lowen A, Lakdawala S, Alwine J, Casadevall A, Imperiale M, Atwood W, Avgousti D, Baines J, Banfield B, Banks L, Bhaduri-McIntosh S, Bhattacharya D, Blanco-Melo D, Bloom D, Boon A, Boulant S, Brandt C, Broadbent A, Brooke C, Cameron C, Campos S, Caposio P, Chan G, Cliffe A, Coffin J, Collins K, Damania B, Daugherty M, Debbink K, DeCaprio J, Dermody T, Dikeakos J, DiMaio D, Dinglasan R, Duprex WP, Dutch R, Elde N, Emerman M, Enquist L, Fane B, Fernandez-Sesma A, Flenniken M, Frappier L, Frieman M, Frueh K, Gack M, Gaglia M, Gallagher T, Galloway D, García-Sastre A, Geballe A, Glaunsinger B, Goff S, Greninger A, Hancock M, Harris E, Heaton N, Heise M, Heldwein E, Hogue B, Horner S, Hutchinson E, Hyser J, Jackson W, Kalejta R, Kamil J, Karst S, Kirchhoff F, Knipe D, Kowalik T, Lagunoff M, Laimins L, Langlois R, Lauring A, Lee B, Leib D, Liu SL, Longnecker R, Lopez C, Luftig M, Lund J, Manicassamy B, McFadden G, McIntosh M, Mehle A, Miller WA, Mohr I, Moody C, Moorman N, Moscona A, Mounce B, Munger J, Münger K, Murphy E, Naghavi M, Nelson J, Neufeldt C, Nikolich J, O'Connor C, Ono A, Orenstein W, Ornelles D, Ou JH, Parker J, Parrish C, Pekosz A, Pellett P, Pfeiffer J, Plemper R, Polyak S, Purdy J, Pyeon D, Quinones-Mateu M, Renne R, Rice C, Schoggins J, Roller R, Russell C, Sandri-Goldin R, Sapp M, Schang L, Schmid S, Schultz-Cherry S, Semler B, Shenk T, Silvestri G, Simon V, Smith G, Smith J, Spindler K, Stanifer M, Subbarao K, Sundquist W, Suthar M, Sutton T, Tai A, Tarakanova V, tenOever B, Tibbetts S, Tompkins S, Toth Z, Van Doorslaer K, Vignuzzi M, Wallace N, Walsh D, Weekes M, Weinberg J, Weitzman M, Weller S, Whelan S, White E, Williams B, Wobus C, Wong S, Yurochko A. Virology under the Microscope-a Call for Rational Discourse. mSphere. 2023 Jan 26:e0003423. doi: 10.1128/msphere.00034-23. Online ahead of print. PMID: 36700653. Pubmed.
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  33. Goodrum F, Lowen A, Lakdawala S, Alwine J, Casadevall A, Imperiale M, Atwood W, Avgousti D, Baines J, Banfield B, Banks L, Bhaduri-McIntosh S, Bhattacharya D, Blanco-Melo D, Bloom D, Boon A, Boulant S, Brandt C, Broadbent A, Brooke C, Cameron C, Campos S, Caposio P, Chan G, Cliffe A, Coffin J, Collins K, Damania B, Daugherty M, Debbink K, DeCaprio J, Dermody T, Dikeakos J, DiMaio D, Dinglasan R, Duprex WP, Dutch R, Elde N, Emerman M, Enquist L, Fane B, Fernandez-Sesma A, Flenniken M, Frappier L, Frieman M, Frueh K, Gack M, Gaglia M, Gallagher T, Galloway D, García-Sastre A, Geballe A, Glaunsinger B, Goff S, Greninger A, Hancock M, Harris E, Heaton N, Heise M, Heldwein E, Hogue B, Horner S, Hutchinson E, Hyser J, Jackson W, Kalejta R, Kamil J, Karst S, Kirchhoff F, Knipe D, Kowalik T, Lagunoff M, Laimins L, Langlois R, Lauring A, Lee B, Leib D, Liu SL, Longnecker R, Lopez C, Luftig M, Lund J, Manicassamy B, McFadden G, McIntosh M, Mehle A, Miller WA, Mohr I, Moody C, Moorman N, Moscona A, Mounce B, Munger J, Münger K, Murphy E, Naghavi M, Nelson J, Neufeldt C, Nikolich J, O'Connor C, Ono A, Orenstein W, Ornelles D, Ou JH, Parker J, Parrish C, Pekosz A, Pellett P, Pfeiffer J, Plemper R, Polyak S, Purdy J, Pyeon D, Quinones-Mateu M, Renne R, Rice C, Schoggins J, Roller R, Russell C, Sandri-Goldin R, Sapp M, Schang L, Schmid S, Schultz-Cherry S, Semler B, Shenk T, Silvestri G, Simon V, Smith G, Smith J, Spindler K, Stanifer M, Subbarao K, Sundquist W, Suthar M, Sutton T, Tai A, Tarakanova V, tenOever B, Tibbetts S, Tompkins S, Toth Z, Van Doorslaer K, Vignuzzi M, Wallace N, Walsh D, Weekes M, Weinberg J, Weitzman M, Weller S, Whelan S, White E, Williams B, Wobus C, Wong S, Yurochko A. Virology under the Microscope-a Call for Rational Discourse. J Virol. 2023 Jan 26:e0008923. doi: 10.1128/jvi.00089-23. Online ahead of print. PMID: 36700640. Pubmed.
  34. Rizzato M, Mao F, Chardon F, Lai K-Y, Villalonga-Planells R, Hannes CA, Drexler, Marion, Pesenti E, Fiskin M, Roos N, King KM, Li S, Gamez ER, Greune L, Dersch P, Simon C, Masson M, Van Doorslaer K, Campos SK, Schelhaas M. Master mitotic kinases regulate viral genome delivery during papillomavirus cell entry. Nat Commun. 2023 Jan 23;14(1):355. doi: 10.1038/s41467-023-35874-w. PMID: 36683055.. Pubmed.
  35. Paietta EN, Kraberger S, Custer JM, Vargas KL, Van Doorslaer K, Yoder AD, Varsani A. Identification of diverse papillomaviruses in captive black-and-white ruffed lemurs (Varecia variegata). Arch Virol. 2022 Dec 28;168(1):13. doi: 10.1007/s00705-022-05679-1. PMID: 36576610. Pubmed.
  36. Van Doorslaer K$. Revisiting Papillomavirus Taxonomy: A Proposal for Updating the Current Classification in Line with Evolutionary Evidence. Viruses. 2022 Oct 21;14(10):2308. doi: 10.3390/v14102308. PMID: 36298863; PMCID: PMC9612317. Pubmed.
  37. King KM, Rajadhyaksha EV, Tobey IG, Van Doorslaer K$. Synonymous nucleotide changes drive papillomavirus evolution. Tumour Virus Res. 2022 Dec;14:200248. doi: 10.1016/j.tvr.2022.200248. Epub 2022 Oct 17. PMID: 36265836; PMCID: PMC9589209. Pubmed.
  38. Harding C, Larsen BB, Gryseels S, Otto HW, Suazo C, Kraberger S, Upham NS, Worobey M, Van Doorslaer K, Varsani A. Discovery of three cycloviruses in fecal samples from silver-haired bats (Lasionycteris noctivagans) in Arizona (USA). Arch Virol. 2022 Aug 31:1-5. doi: 10.1007/s00705-022-05574-9. Online ahead of print. PMID: 36045303. Pubmed.
  39. Walker PJ, Siddell SG, Lefkowitz EJ, Mushegian AR, Adriaenssens EM, Alfenas-Zerbini P, Dempsey DM, Dutilh BE, García ML, Curtis Hendrickson R, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Łobocka M, Oksanen HM, Orton RJ, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Smith DB, Suzuki N, Van Doorslaer K, Vandamme AM, Varsani A, Zerbini FM. Recent changes to virus taxonomy ratified by the International Committee on Taxonomy of Viruses (2022). Arch Virol. 2022 Aug 23. doi: 10.1007/s00705-022-05516-5. Online ahead of print. PMID: 35999326. Pubmed.
  40. Lee MS, Tuohy PJ, Kim CY, Lichauco K, Parrish HL, Van Doorslaer K$, Kuhns MS. Enhancing and inhibitory motifs regulate CD4 activity. Elife. 2022 Jul 21;11:e79508. doi: 10.7554/eLife.79508. PMID: 35861317; PMCID: PMC9333989. Pubmed.
  41. King K, Larsen BB, Gryseels S, Richet C, Kraberger S, Jackson R, Worobey M, Harrison JS, Varsani A, Van Doorslaer K$. Coevolutionary Analysis Implicates Toll-Like Receptor 9 in Papillomavirus Restriction. mBio. 2022 Apr 26;13(2):e0005422. doi: 10.1128/mbio.00054-22. Epub 2022 Mar 21. PMID: 35311536. Pubmed.
  42. Zerbini FM, Siddell SG, Mushegian AR, Walker PJ, Lefkowitz EJ, Adriaenssens EM, Alfenas-Zerbini P, Dutilh BE, García ML, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Łobocka M, Oksanen HM, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Suzuki N, Van Doorslaer K Vandamme AM, Varsani A. Differentiating between viruses and virus species by writing their names correctly. Arch Virol. 2022 Apr;167(4):1231-1234. doi: 10.1007/s00705-021-05323-4. PMID: 35043230. Pubmed.
  43. Kraberger S, Austin C, Farkas K, Desvignes T, Postlethwait JH, Fontenele RS, Schmidlin K, Bradley RW, Warzybok P, Van Doorslaer K, Davison W, Buck CB, Varsani A. Discovery of novel fish papillomaviruses: From the Antarctic to the commercial fish market. Virology. 2022 Jan 2;565:65-72. doi: 10.1016/j.virol.2021.10.007. Epub 2021 Nov 2. PMID: 34739918. Pubmed.
  44. Schmidlin K, Kraberger S, Cook C, DeNardo DF, Fontenele RS, Van Doorslaer K Martin DP, Buck CB, Varsani A. A novel lineage of polyomaviruses identified in bark scorpions. Virology. 2021 Nov;563:58-63. doi: 10.1016/j.virol.2021.08.008.Epub 2021 Aug 18. PMID: 34425496. Pubmed.
  45. Kraberger S, Serieys LE, Richet C, Fountain-Jones NM, Baele G, Bishop JM, Nehring M, Ivan JS, Newkirk ES, Squires JR, Lund MC, Riley SP, Wilmers CC, van Helden PD, Van Doorslaer K, Culver M, VandeWoude S, Martin DP, Varsani A. Complex evolutionary history of felid anelloviruses. Virology. 2021 Oct;562:176-189. doi: 10.1016/j.virol.2021.07.013. Epub 2021 Jul 29. PMID: 34364185. Pubmed.
  46. Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses. Walker PJ., Siddell SG., Lefkowitz EJ., Mushegian AR., Adriaenssens EM., Alfenas-Zerbini P., Davison AJ., Dempsey DM., Dutilh BE., García ML., Harrach B., Harrison RL., Hendrickson RC., Junglen S., Knowles NJ., Krupovic M., Kuhn JH., Lambert AJ., Łobocka M., Nibert ML., Oksanen HM., Orton RJ., Robertson DL., Rubino L., Sabanadzovic S., Simmonds P., Smith DB., Suzuki N., Van Doorslaer K, Vandamme AM., Varsani A., Zerbini FM. Arch Virol. 2021 Jul 6. doi: 10.1007/s00705-021-05156-1. PMID: 34231026. Pubmed.
  47. Coursey, TL., Van Doorslaer K, & McBride, AA. Sequences in the Human papillomavirus Type 18 (HPV18) Upstream Regulatory Region regulate Viral Genome Replication, Establishment and Persistence. J Virol. 2021 Jul 7: JVI0068621. doi: 10.1128/JVI.00686-21. Online ahead of print. PMID: 34232709. Pubmed.
  48. HPV32-related Heck's disease in a chronic graft-versus-host disease patient with long-term successful KTP laser treatment: A rare case report., Nguyen JT, Allen CT, Dodge JT, Van Doorslaer K McBride AA, Pavletic SZ, Mays JW., Clin Case Rep. 2021 May 15;9(5):e04253. doi: 10.1002/ccr3.4253. PMID: 34026202; PMCID: PMC8123741. Pubmed.
  49. Szpara ML, Van Doorslaer K$. Mechanisms of DNA Virus Evolution. Encyclopedia of Virology. 2021 Mar 1; p. 71. doi: 10.1016/B978-0-12-809633-8.20993-X. PMCID: PMC7173537.
  50. 3D Oral and Cervical Tissue Models for Studying Papillomavirus Host-Pathogen Interactions., Jackson R, Maarsingh JD, Herbst-Kralovetz MM, Van Doorslaer K$. Curr Protoc Microbiol. 2020 Dec;59(1):e129. doi: 10.1002/cpmc.129. PMID: 33232584. Pubmed.
  51. Vesicular trafficking permits evasion of cGAS/STING surveillance during initial human papillomavirus infection., Uhlorn BL, Jackson R, Li S, Bratton SM, Van Doorslaer K$, Campos SK., PLoS Pathog. 2020 Nov 30;16(11):e1009028. doi: 10.1371/journal.ppat.1009028. PMID: 33253291; PMCID: PMC7728285. Pubmed.
  52. Payne N, Kraberger S, Fontenele RS, Schmidlin K, Bergeman MH, Cassaigne I, Culver M, Varsani A, Van Doorslaer K$. Novel Circoviruses Detected in Feces of Sonoran Felids., Viruses. 2020 Sep 15;12(9):1027. doi: 10.3390/v12091027. PMID: 32942563; PMCID: PMC7551060. Pubmed.
  53. PuMA: A papillomavirus genome annotation tool. Virus Evol. 2020 Aug 26;6(2):veaa068., Pace J, Youens-Clark K, Freeman C, Hurwitz B, Van Doorslaer K$. doi: 10.1093/ve/veaa068. PMID: 33381306; PMCID: PMC7751161. Pubmed.
  54. A Novel Divergent Geminivirus Identified in Asymptomatic New World Cactaceae Plants, Fontenele RS, Salywon AM, Majure LC, Cobb IN, Bhaskara A, Avalos-Calleros JA, Argüello-Astorga GR, Schmidlin K, Khalifeh A, Smith K, Schreck J, Lund MC, Köhler M, Wojciechowski MF, Hodgson WC, Puente-Martinez R, Van Doorslaer K, Kumari S, Vernière C, Filloux D, Roumagnac P, Lefeuvre P, Ribeiro S, Kraberger S, Martin DP, Varsani A., Viruses 2020, 12, 398. doi: 10.3390/v12040398. PMID: 32260283. Pubmed.
  55. Rules of Expansion: an Updated Consensus Operator Site for the CopR-CopY Family of Bacterial Copper Exporter System Repressors. O'Brien H, Alvin JW, Menghani SV, Sanchez-Rosario Y, Van Doorslaer K, Johnson MDL. mSphere. 2020 May 27;5(3):e00411-20. doi: 10.1128/mSphere.00411-20. PMID: 32461276. Pubmed.
  56. Insertional oncogenesis by HPV70 revealed by multiple genomic analyses in a clinically HPV-negative cervical cancer. Van Arsdale A, Patterson NE, Maggi EC, Agoni L, Van Doorslaer K, Harmon B, Nevadunsky N, Kuo DYS, Einstein MH, Lenz J, Montagna C. Genes Chromosomes Cancer 2019 Aug 13. doi: 10.1002/gcc.22799. PMID: 31407403. Pubmed.
  57. Neisseria gonorrhoeae evades autophagic killing by downregulating CD46-cyt1 and remodeling lysosomes. Kim WJ, Mai A, Weyand NJ, Rendón MA, Van Doorslaer K, So M. PLoS Pathog. 2019 Feb 12;15(2):e1007495. doi: 10.1371/journal.ppat.1007495. eCollection 2019 Feb. PMID: 30753248. Pubmed.
  58. The Launch of an International Animal Papillomavirus Reference Center. Van Doorslaer K$ and Dillner J.Viruses. 2019 Jan 14;11(1). pii: E55. doi: 10.3390/v11010055. PMID: 30646493. PMCID: PMC7173537. Pubmed.
  59. Metagenomic Discovery of 83 New Human Papillomavirus Types in Patients with Immunodeficiency. Pastrana DV, Peretti A, Welch NL, Borgogna C, Olivero C, Badolato R, Notarangelo LD, Gariglio M, FitzGerald PC, McIntosh CE, Reeves J, Starrett GJ, Bliskovsky V, Velez D, Brownell I, Yarchoan R, Wyvill KM, Uldrick TS, Maldarelli F, Lisco A, Sereti I, Gonzalez CM, Androphy EJ, McBride AA, Van Doorslaer K, Garcia F, Dvoretzky I, Liu JS, Han J, Murphy PM, McDermott DH, Buck CB.mSphere. 2018 Dec 12;3(6). pii: e00645-18. doi: 10.1128/mSphereDirect.00645-18. PMID: 30541782. Pubmed.
  60. Building (viral) phylogenetic trees using a Maximum Likelihood approach. King K, Van Doorslaer K$. Curr Protoc Microbiol. 2018 Nov;51(1):e63. doi: 10.1002/cpmc.63. PMID: 30265446. Pubmed.
  61. ICTV Virus Taxonomy Profile: Papillomaviridae. Van Doorslaer K$, Chen Z; Bernard HU; Chan PKS, DeSalle R, Dillner J, Forslund O, Haga T, McBride AA, Villa LL, Burk RD, ICTV Consortium. J Gen Virol. 2018 Aug;99(8):989-990. doi: 10.1099/jgv.0.001105. Epub 2018 Jun 21. PMID: 29927370. Pubmed.
  62. Fish polyomaviruses belong to two distinct evolutionary lineages. Van Doorslaer K$, Kraberger S, Austin C, Farkas K, Bergeman M, Paunil E, Davison W, Varsani A. J Gen Virol. 2018 Apr;99(4):567-573. doi: 10.1099/jgv.0.001041. Epub 2018 Mar 8. PMID: 29517483. Pubmed.
  63. Diverse papillomaviruses identified in Weddell seals. Smeele ZE, Burns JM, Van Doorslaer K Fontenele RS, Waits K, Stainton D, Shero MR, Beltran RS, Kirkham AL, Berngartt R, Kraberger S, Varsani A. J Gen Virol. 2018 Apr;99(4):549-557. doi: 10.1099/jgv.0.001028. Epub 2018 Feb 22. PMID: 29469687. Pubmed.
  64. Persistence of an Oncogenic Papillomavirus Genome Requires cis Elements from the Viral Transcriptional Enhancer. Van Doorslaer K, Chen D, Chapman S, Khan J, McBride AA. MBio. 2017 Nov 21;8(6). pii: e01758-17. doi: 10.1128/mBio.01758-17. PMID: 29162712. Pubmed.
  65. Unique genome organization of non-mammalian papillomaviruses provides insights into the evolution of viral early proteins. Van Doorslaer K$, Ruoppolo V, Schmidt A, Lescroël A, Jongsomjit D, Elrod M, Kraberger S, Stainton D, Dugger KM, Ballard G, Ainley DG, Varsani A. Virus Evol. 2017 Oct 6;3(2):vex027. doi: 10.1093/ve/vex027. eCollection 2017 Jul. PMID: 29026649. Pubmed.
  66. Roles of APOBEC3A and APOBEC3B in Human Papillomavirus Infection and Disease Progression. Warren CJ, Westrich JA, Van Doorslaer K, Pyeon D. Viruses. 2017 Aug 21;9(8). pii: E233. doi: 10.3390/v9080233. PMID: 28825669. Pubmed.
  67. The Papillomavirus Episteme: a major update to the papillomavirus sequence database. Van Doorslaer K, Li Z, Xirasagar S, Maes P, Kaminsky D, Liou D, Sun Q, Kaur R, Huyen Y, McBride AA. Nucleic Acids Res. 2017 Jan 4;45(D1):D499-D506. doi: 10.1093/nar/gkw879. Epub 2016 Oct 5. PMID: 28053164. Pubmed.
  68. Novel recombinant papillomavirus genomes expressing selectable genes., Van Doorslaer K Porter S, McKinney C, Stepp WH, McBride AA. Sci Rep. 2016 Nov 28;6:37782. doi: 10.1038/srep37782. PMID: 27892937. Pubmed.
  69. Detection and Genotyping of Human Papillomaviruses from Archival Formalin-Fixed Tissue Samples. Van Doorslaer K, Chen Z, McBride AA. Curr Protoc Microbiol. 2016 Nov 18;43:14B.9.1-14B.9.20. doi: 10.1002/cpmc.16. PMID: 27858973. Pubmed.
  70. Molecular archeological evidence in support of the repeated loss of a papillomavirus gene. Van Doorslaer K$, McBride AA. Sci Rep. 2016 Sep 8;6:33028. doi: 10.1038/srep33028. PMID: 27604338. Pubmed.
  71. The Ancient Evolutionary History of Polyomaviruses. Buck CB, Van Doorslaer K, Peretti A, Geoghegan EM, Tisza MJ, An P, Katz JP, Pipas JM, McBride AA, Camus AC, McDermott AJ, Dill JA, Delwart E, Ng TF, Farkas K, Austin C, Kraberger S, Davison W, Pastrana DV, Varsani A. PLoS Pathog. 2016 Apr 19;12(4):e1005574. doi: 10.1371/journal.ppat.1005574. eCollection 2016 Apr. PMID: 27093155. Pubmed.
  72. UbSRD: The Ubiquitin Structural Relational Database. Harrison JS, Jacobs TM, Houlihan K, Van Doorslaer K Kuhlman B. J Mol Biol. 2016 Feb 22;428(4):679-687. doi: 10.1016/j.jmb.2015.09.011. Epub 2015 Sep 25. PMID: 26392143. Pubmed.
  73. Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche. Van Doorslaer K, DeSalle R, Einstein MH, Burk RD. PLoS Pathog. 2015 Jun 18;11(6):e1004980. doi: 10.1371/journal.ppat.1004980. eCollection 2015 Jun. PMID: 26086730. Pubmed.
  74. A proteomic approach to discover and compare interacting partners of papillomavirus E2 proteins from diverse phylogenetic groups. Jang MK, Anderson DE, Van Doorslaer K McBride AA. Proteomics. 2015 Jun;15(12):2038-50. doi: 10.1002/pmic.201400613. Epub 2015 Apr 28. PMID: 25758368. Pubmed.
  75. Role of the host restriction factor APOBEC3 on papillomavirus evolution. Van Doorslaer K, Warren CJ, Pandey A, Espinosa JM, Pyeon D. Virus Evol. 2015 Jan;1(1). pii: vev015. Epub 2015 Jan 1. PMID: 27570633. Pubmed.
  76. Evolution of the papillomaviridae. Van Doorslaer K$ Virology. 2013 Oct;445(1-2):11-20. doi: 10.1016/j.virol.2013.05.012. Epub 2013 Jun 14. PMID: 23769415. Pubmed.
  77. Condylomatous genital lesions in cynomolgus macaques from Mauritius. Harari A, Wood CE, Van Doorslaer K, Chen Z, Domaingue MC, Elmore D, Koenig P, Wagner JD, Jennings RN, Burk RD. Toxicol Pathol. 2013 Aug;41(6):893-901. doi: 10.1177/0192623312467521. Epub 2012 Dec 21. PMID: 23262641. Pubmed.
  78. The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis. Van Doorslaer K, Tan Q, Xirasagar S, Bandaru S, Gopalan V, Mohamoud Y, Huyen Y, McBride AA. Nucleic Acids Res. 2013 Jan;41(Database issue):D571-8. doi: 10.1093/nar/gks984. Epub 2012 Oct 23. PMID: 23093593. Pubmed.
  79. *Association between hTERT activation by HPV E6 proteins and oncogenic risk. Van Doorslaer K, Burk RD. Virology. 2012 Nov 10;433(1):216-9. doi: 10.1016/j.virol.2012.08.006. Epub 2012 Aug 25. PMID: 22925336. Pubmed.
  80. *Sequence imputation of HPV16 genomes for genetic association studies. Smith B, Chen Z, Reimers L, Van Doorslaer K, Schiffman M, Desalle R, Herrero R, Yu K, Wacholder S, Wang T, Burk RD. PLoS One. 2011;6(6):e21375. doi: 10.1371/journal.pone.0021375. Epub 2011 Jun 23. PMID: 21731721. Pubmed.
  81. *Papillomaviruses: evolution, Linnaean taxonomy and current nomenclature. Van Doorslaer K Bernard HU, Chen Z, de Villiers EM, zur Hausen H, Burk RD. Trends Microbiol. 2011 Feb;19(2):49-50; author reply 50-1. doi: 10.1016/j.tim.2010.11.004. Epub 2010 Dec 7. No abstract available. PMID: 21144754. Pubmed.
  82. *Novel betapapillomavirus associated with hand and foot papillomas in a cynomolgus macaque. Wood CE, Tannehill-Gregg SH, Chen Z, Van Doorslaer K, Nelson DR, Cline JM, Burk RD. Vet Pathol. 2011 May;48(3):731-6. doi: 10.1177/0300985810383875. Epub 2010 Oct 4. PMID: 20921322. Pubmed.
  83. *Evolution of human papillomavirus carcinogenicity. Van Doorslaer K, Burk RD. Adv Virus Res. 2010;77:41-62. doi: 10.1016/B978-0-12-385034-8.00002-8. PMID: 20951869. Pubmed.
  84. *Degradation of p53 by human Alphapapillomavirus E6 proteins shows a stronger correlation with phylogeny than oncogenicity. Fu L, Van Doorslaer K, Chen Z, Ristriani T, Masson M, Travé G, Burk RD. PLoS One. 2010 Sep 17;5(9). pii: e12816. doi: 10.1371/journal.pone.0012816. PMID: 20862247. Pubmed.
  85. *Overexpression of miR-21 promotes an in vitro metastatic phenotype by targeting the tumor suppressor RHOB. Connolly EC, Van Doorslaer K, Rogler LE, Rogler CE. Mol Cancer Res. 2010 May;8(5):691-700. doi: 10.1158/1541-7786.MCR-09-0465. Epub 2010 May 11. PMID: 20460403. Pubmed.
  86. *Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Bernard HU, Burk RD, Chen Z, Van Doorslaer K, zur Hausen H, de Villiers EM. Virology. 2010 May 25;401(1):70-9. doi: 10.1016/j.virol.2010.02.002. Epub 2010 Mar 5. PMID: 20206957. Pubmed.
  87. *Lack of heterogeneity of HPV16 E7 sequence compared with HPV31 and HPV73 may be related to its unique carcinogenic properties. Safaeian M, Van Doorslaer K, Schiffman M, Chen Z, Rodriguez AC, Herrero R, Hildesheim A, Burk RD. Arch Virol. 2010 Mar;155(3):367-70. doi: 10.1007/s00705-009-0579-2. Epub 2010 Jan 6. PMID: 20049619. Pubmed.
  88. *Serological response to an HPV16 E7 based therapeutic vaccine in women with high-grade cervical dysplasia. Van Doorslaer K, Reimers LL, Studentsov YY, Einstein MH, Burk RD. Gynecol Oncol. 2010 Feb;116(2):208-12. doi: 10.1016/j.ygyno.2009.05.044. Epub 2009 Jun 24. PMID: 19555999. Pubmed.
  89. *Genomic diversity and interspecies host infection of alpha12 Macaca fascicularis papillomaviruses (MfPVs). Chen Z, Van Doorslaer K, DeSalle R, Wood CE, Kaplan JR, Wagner JD, Burk RD. Virology. 2009 Oct 25;393(2):304-10. doi: 10.1016/j.virol.2009.07.012. Epub 2009 Aug 28. PMID: 19716580. Pubmed.
  90. *Human papillomaviruses: genetic basis of carcinogenicity. Burk RD, Chen Z, Van Doorslaer K. Public Health Genomics. 2009;12(5-6):281-90. doi: 10.1159/000214919. Epub 2009 Aug 11. PMID: 19684441. Pubmed.
  91. *Identification of unusual E6 and E7 proteins within avian papillomaviruses: cellular localization, biophysical characterization, and phylogenetic analysis. Van Doorslaer K, Sidi AO, Zanier K, Rybin V, Deryckère F, Rector A, Burk RD, Lienau EK, van Ranst M, Travé G. J Virol. 2009 Sep;83(17):8759-70. doi: 10.1128/JVI.01777-08. Epub 2009 Jun 24. PMID: 19553340. Pubmed.
  92. *Macaca fascicularis papillomavirus type 1: a non-human primate betapapillomavirus causing rapidly progressive hand and foot papillomatosis. Joh J, Hopper K, Van Doorslaer K. Sundberg JP, Jenson AB, Ghim SJ. J Gen Virol. 2009 Apr;90(Pt 4):987-94. doi: 10.1099/vir.0.006544-0. Epub 2009 Mar 4. PMID: 19264664. Pubmed.
  93. *A single amino acid substitution in a segment of the CA protein within Gag that has similarity to human immunodeficiency virus type 1 blocks infectivity of a human endogenous retrovirus K provirus in the human genome. Heslin DJ, Murcia P, Arnaud F, Van Doorslaer K, Palmarini M, Lenz J. J Virol. 2009 Jan;83(2):1105-14. doi: 10.1128/JVI.01439-08. Epub 2008 Nov 12. PMID: 19004950. Pubmed.
  94. *Genomic characterization of two novel reptilian papillomaviruses, Chelonia mydas papillomavirus 1 and Caretta caretta papillomavirus 1. Herbst LH, Lenz J, Van Doorslaer K, Chen Z, Stacy BA, Wellehan JF Jr, Manire CA, Burk RD. Virology. 2009 Jan 5;383(1):131-5. doi: 10.1016/j.virol.2008.09.022. Epub 2008 Oct 29. PMID: 18973915. Pubmed.
  95. Genomic characterization of novel dolphin papillomaviruses provides indications for recombination within the Papillomaviridae. Rector A, Stevens H, Lacave G, Lemey P, Mostmans S, Salbany A, Vos M, Van Doorslaer K, Ghim SJ, Rehtanz M, Bossart GD, Jenson AB, Van Ranst M. Virology. 2008 Aug 15;378(1):151-61. doi: 10.1016/j.virol.2008.05.020. Epub 2008 Jun 24. PMID: 18579177. Pubmed.
  96. Ancient papillomavirus-host co-speciation in Felidae. Rector A, Lemey P, Tachezy R, Mostmans S, Ghim SJ, Van Doorslaer K, Roelke M, Bush M, Montali RJ, Joslin J, Burk RD, Jenson AB, Sundberg JP, Shapiro B, Van Ranst M. Genome Biol. 2007;8(4):R57. PMID: 17430578. Pubmed.
  97. Complete genomic characterization of a murine papillomavirus isolated from papillomatous lesions of a European harvest mouse (Micromys minutus). Van Doorslaer K, Rector A, Jenson AB, Sundberg JP, Van Ranst M, Ghim SJ. J Gen Virol. 2007 May;88(Pt 5):1484-8. PMID: 17412977. Pubmed.
  98. Genetic characterization of the first chiropteran papillomavirus, isolated from a basosquamous carcinoma in an Egyptian fruit bat: the Rousettus aegyptiacus papillomavirus type 1. Rector A, Mostmans S, Van Doorslaer K, McKnight CA, Maes RK, Wise AG, Kiupel M, Van Ranst M. Vet Microbiol. 2006 Oct 31;117(2-4):267-75. Epub 2006 Jul 18. PMID: 16854536. Pubmed.
  99. Genetic characterization of the Capra hircus papillomavirus: a novel close-to-root artiodactyl papillomavirus. Van Doorslaer K, Rector A, Vos P, Van Ranst M. Virus Res. 2006 Jun;118(1-2):164-9. Epub 2006 Jan 23. PMID: 16430985. Pubmed.
  100. Isolation and cloning of the raccoon (Procyon lotor) papillomavirus type 1 by using degenerate papillomavirus-specific primers. Rector A, Van Doorslaer K, Bertelsen M, Barker IK, Olberg RA, Lemey P, Sundberg JP, Van Ranst M. J Gen Virol. 2005 Jul;86(Pt 7):2029-33. PMID: 15958682. Pubmed.
  101. Isolation and cloning of a papillomavirus from a North American porcupine by using multiply primed rolling-circle amplification: the Erethizon dorsatum papillomavirus type 1. Rector A, Tachezy R, Van Doorslaer K, MacNamara T, Burk RD, Sundberg JP, Van Ranst M. Virology. 2005 Jan 20;331(2):449-56. PMID: 15629787. Pubmed.