The Van Doorslaer lab at the University of Arizona

Publications involving our group at the University of Arizona

   mentees in the KVD lab are highlighted in bold and italics

   * (co-)correspponding authorship | $ equal contributors authorship

  1. Enhancing and inhibitory motifs regulate CD4 activity. Lee MS, Tuohy PJ, Kim CY, Lichauco K, Parrish HL, Van Doorslaer K*, Kuhns MS. Elife. 2022 Jul 21;11:e79508. Pubmed.
  2. Coevolutionary Analysis Implicates Toll-Like Receptor 9 in Papillomavirus Restriction. King K, Larsen BB, Gryseels S, Richet C, Kraberger S, Jackson R, Worobey M, Harrison JS, Varsani A, Van Doorslaer K. mBio. 2022 Apr 26;13(2):e0005422. doi: 10.1128/mbio.00054-22. Pubmed.
  3. Differentiating between viruses and virus species by writing their names correctly. Zerbini FM, Siddell SG, Mushegian AR, Walker PJ, Lefkowitz EJ, Adriaenssens EM, Alfenas-Zerbini P, Dutilh BE, García ML, Junglen S, Krupovic M, Kuhn JH, Lambert AJ, Łobocka M, Oksanen HM, Robertson DL, Rubino L, Sabanadzovic S, Simmonds P, Suzuki N, Van Doorslaer K, Vandamme AM, Varsani A. Arch Virol. 2022 Apr;167(4):1231-1234. Pubmed.
  4. Discovery of novel fish papillomaviruses: From the Antarctic to the commercial fish market. Kraberger S, Austin C, Farkas K, Desvignes T, Postlethwait JH, Fontenele RS, Schmidlin K, Bradley RW, Warzybok P, Van Doorslaer K, Davison W, Buck CB, Varsani A. Virology. 2022 Jan 2;565:65-72. doi: 10.1016/j.virol.2021.10.007. Pubmed.
  5. A novel lineage of polyomaviruses identified in bark scorpions. Schmidlin K, Kraberger S, Cook C, DeNardo DF, Fontenele RS, Van Doorslaer K, Martin DP, Buck CB, Varsani A. Virology. 2021 Nov;563:58-63. doi: 10.1016/j.virol.2021.08.008. Pubmed.
  6. Complex evolutionary history of felid anelloviruses. Kraberger S, Serieys LE, Richet C, Fountain-Jones NM, Baele G, Bishop JM, Nehring M, Ivan JS, Newkirk ES, Squires JR, Lund MC, Riley SP, Wilmers CC, van Helden PD, Van Doorslaer K, Culver M, VandeWoude S, Martin DP, Varsani A. Virology. 2021 Oct;562:176-189. doi: 10.1016/j.virol.2021.07.013. Pubmed.
  7. Regulation of Human Papillomavirus 18 Genome Replication, Establishment, and Persistence by Sequences in the Viral Upstream Regulatory Region. Coursey TL, Van Doorslaer K, McBride AA. J Virol. 2021 Sep 9;95(19):e0068621. doi: 10.1128/JVI.00686-21. Pubmed.
  8. HPV32-related Heck's disease in a chronic graft-versus-host disease patient with long-term successful KTP laser treatment: A rare case report. Nguyen JT, Allen CT, Dodge JT, Van Doorslaer K, McBride AA, Pavletic SZ, Mays JW. Clin Case Rep. 2021 May 15;9(5):e04253. Pubmed.
  9. New World Cactaceae Plants Harbor Diverse Geminiviruses. Fontenele RS, Salywon AM, Majure LC, Cobb IN, Bhaskara A, Avalos-Calleros JA, Argüello-Astorga GR, Schmidlin K, Khalifeh A, Smith K, Schreck J, Lund MC, Köhler M, Wojciechowski MF, Hodgson WC, Puente-Martinez R, Van Doorslaer K, Kumari S, Oyeniran KA, Vernière C, Filloux D, Roumagnac P, Lefeuvre P, Ribeiro SG, Kraberger SP, Martin DP, Varsani A. Viruses. 2021 Apr 16;13(4):694. Pubmed.
  10. PuMA: A papillomavirus genome annotation tool. Pace J, Youens-Clark K, Freeman C, Hurwitz B, Van Doorslaer K. Virus Evol. 2020 Aug 26;6(2):veaa068. Pubmed.
  11. Vesicular trafficking permits evasion of cGAS/STING surveillance during initial human papillomavirus infection. Uhlorn BL, Jackson R$, Li S, Bratton SM, Van Doorslaer K*, Campos SK. PLoS Pathog. 2020 Nov 30;16(11):e1009028. Pubmed.
  12. 3D Oral and Cervical Tissue Models for Studying Papillomavirus Host-Pathogen Interactions. Jackson R$, Maarsingh JD, Herbst-Kralovetz MM, Van Doorslaer K*. Curr Protoc Microbiol. 2020 Dec;59(1):e129. Pubmed.
  13. Novel Circoviruses Detected in Feces of Sonoran Felids. Payne N, Kraberger S, Fontenele RS, Schmidlin K, Bergeman MH, Cassaigne I, Culver M, Varsani A, Van Doorslaer K. Viruses. 2020 Sep 15;12(9):1027. Pubmed.
  14. Rules of Expansion: an Updated Consensus Operator Site for the CopR-CopY Family of Bacterial Copper Exporter System Repressors. O'Brien H, Alvin JW, Menghani SV, Sanchez-Rosario Y, Van Doorslaer K, Johnson MDL. mSphere. 2020 May 27;5(3):e00411-20. Pubmed.
  15. A Novel Divergent Geminivirus Identified in Asymptomatic New World Cactaceae Plants. Fontenele RS, Salywon AM, Majure LC, Cobb IN, Bhaskara A, Avalos-Calleros JA, Argüello-Astorga GR, Schmidlin K, Khalifeh A, Smith K, Schreck J, Lund MC, Köhler M, Wojciechowski MF, Hodgson WC, Puente-Martinez R, Van Doorslaer K, Kumari S, Vernière C, Filloux D, Roumagnac P, Lefeuvre P, Ribeiro SG, Kraberger S, Martin DP, Varsani A. Viruses. 2020 Apr 3;12(4):398. Pubmed.
  16. Insertional oncogenesis by HPV70 revealed by multiple genomic analyses in a clinically HPV-negative cervical cancer. Van Arsdale A, Patterson NE, Maggi EC, Agoni L, Van Doorslaer K, Harmon B, Nevadunsky N, Kuo DYS, Einstein MH, Lenz J, Montagna C. Genes Chromosomes Cancer. 2020 Feb;59(2):84-95. doi: 10.1002/gcc.22799. Pubmed.
  17. Neisseria gonorrhoeae evades autophagic killing by downregulating CD46-cyt1 and remodeling lysosomes. Kim WJ, Mai A, Weyand NJ, Rendón MA, Van Doorslaer K, So M. PLoS Pathog. 2019 Feb 12;15(2):e1007495. Pubmed.
  18. The Launch of an International Animal Papillomavirus Reference Center. Van Doorslaer K*, Dillner J. Viruses. 2019 Jan 14;11(1):55. Pubmed.
  19. Metagenomic Discovery of 83 New Human Papillomavirus Types in Patients with Immunodeficiency. Pastrana DV, Peretti A, Welch NL, Borgogna C, Olivero C, Badolato R, Notarangelo LD, Gariglio M, FitzGerald PC, McIntosh CE, Reeves J, Starrett GJ, Bliskovsky V, Velez D, Brownell I, Yarchoan R, Wyvill KM, Uldrick TS, Maldarelli F, Lisco A, Sereti I, Gonzalez CM, Androphy EJ, McBride AA, Van Doorslaer K, Garcia F, Dvoretzky I, Liu JS, Han J, Murphy PM, McDermott DH, Buck CB. mSphere. 2018 Dec 12;3(6):e00645-18. Pubmed.
  20. Building (Viral) Phylogenetic Trees Using a Maximum Likelihood Approach. King KM, Van Doorslaer K. Curr Protoc Microbiol. 2018 Nov;51(1):e63. doi: 10.1002/cpmc.63. Pubmed.
  21. ICTV Virus Taxonomy Profile: Papillomaviridae. Van Doorslaer K*, Chen Z, Bernard HU, Chan PKS, DeSalle R, Dillner J, Forslund O, Haga T, McBride AA, Villa LL, Burk RD, Ictv Report Consortium. J Gen Virol. 2018 Aug;99(8):989-990. doi: 10.1099/jgv.0.001105. Pubmed.
  22. Fish polyomaviruses belong to two distinct evolutionary lineages. Van Doorslaer K*, Kraberger S, Austin C, Farkas K, Bergeman M, Paunil E, Davison W, Varsani A. J Gen Virol. 2018 Apr;99(4):567-573. doi: 10.1099/jgv.0.001041. Pubmed.
  23. Persistence of an Oncogenic Papillomavirus Genome Requires cis Elements from the Viral Transcriptional Enhancer. Van Doorslaer K, Chen D, Chapman S, Khan J, McBride AA. mBio. 2017 Nov 21;8(6):e01758-17. Pubmed.
  24. Unique genome organization of non-mammalian papillomaviruses provides insights into the evolution of viral early proteins. Van Doorslaer K*, Ruoppolo V, Schmidt A, Lescroël A, Jongsomjit D, Elrod M, Kraberger S, Stainton D, Dugger KM, Ballard G, Ainley DG, Varsani A. Virus Evol. 2017 Oct 6;3(2):vex027. Pubmed.
  25. The Papillomavirus Episteme: a major update to the papillomavirus sequence database. Van Doorslaer K, Li Z, Xirasagar S, Maes P, Kaminsky D, Liou D, Sun Q, Kaur R, Huyen Y, McBride AA. Nucleic Acids Res. 2017 Jan 4;45(D1):D499-D506. doi: 10.1093/nar/gkw879. Pubmed.
  26. Novel recombinant papillomavirus genomes expressing selectable genes. Van Doorslaer K, Porter S, McKinney C, Stepp WH, McBride AA. Sci Rep. 2016 Nov 28;6:37782. Pubmed.
  27. Detection and Genotyping of Human Papillomaviruses from Archival Formalin-Fixed Tissue Samples. Van Doorslaer K, Chen Z, McBride AA. Curr Protoc Microbiol. 2016 Nov 18;43:14B.9.1-14B.9.20. Pubmed.
  28. Molecular archeological evidence in support of the repeated loss of a papillomavirus gene. Van Doorslaer K*, McBride AA. Sci Rep. 2016 Sep 8;6:33028. Pubmed.
  29. The Ancient Evolutionary History of Polyomaviruses. Buck CB, Van Doorslaer K*, Peretti A, Geoghegan EM, Tisza MJ, An P, Katz JP, Pipas JM, McBride AA, Camus AC, McDermott AJ, Dill JA, Delwart E, Ng TF, Farkas K, Austin C, Kraberger S, Davison W, Pastrana DV, Varsani A. PLoS Pathog. 2016 Apr 19;12(4):e1005574. Pubmed.
  30. UbSRD: The Ubiquitin Structural Relational Database. Harrison JS, Jacobs TM, Houlihan K, Van Doorslaer K, Kuhlman B. J Mol Biol. 2016 Feb 22;428(4):679-687. doi: 10.1016/j.jmb.2015.09.011. Pubmed.